Occurrence

Kostrzyca Forest Gene Bank Database

Latest version published by Kostrzyca Forest Gene Bank, Poland on 26 November 2024 Kostrzyca Forest Gene Bank, Poland
Kostrzyca Forest Gene Bank (KFGB) extents its forestry conservation efforts by creating DNA and tissue bank of rare and endangered plant species. Since 2017 KFGB has gathered genetic material of 225 plants representing a wide range of taxonomic coverage (50 families, 133 genera, 5403 tissue samples, 1128 DNAs). Herbarium collection is utilized to provide additional resources in future genetic analysis such as DNA barcoding.... More
Publication date:
26 November 2024
License:
CC-BY 4.0

Description

Kostrzyca Forest Gene Bank (KFGB) extents its forestry conservation efforts by creating DNA and tissue bank of rare and endangered plant species. Since 2017 KFGB has gathered genetic material of 225 plants representing a wide range of taxonomic coverage (50 families, 133 genera, 5403 tissue samples, 1128 DNAs). Herbarium collection is utilized to provide additional resources in future genetic analysis such as DNA barcoding.

The vast majority of the taxa belong to Magnoliopsida. Among all of the species there are not only angiosperms, but also representatives of mosses, club mosses and ferns - a total of 225 species belonging to 50 botanical families. The largest collection has Cypreaceae family (30 species), with the representatives of the rarest native Polish flora – Carex buxbaumii Wahlenb., Carex pauciflora Lightf., Carex pulicaris L. The other families with a large representation of species are Orchidaceae (25), Ranunculaceae (20), Poaceae (18).

Taxa that are considered of special importance/significance at our repository: Aconitum bucovinense Zapal., Aconitum firmum subsp. maninense (Skalický) Starm., Aconitum moldavicum subsp. hosteanum (Schur) Graebn. & P.Graebn., Arenaria graminifolia Schrad., Buxbaumia aphylla Hedw., Buxbaumia viridis (DC.) Moug. & Nestl., Callianthemum coriandrifolium Rchb., Lathyrus laevigatus (Waldst. & Kit.) Gren., Oxytropis carpathica R.Uechtr., Polytrichastrum formosum (Hedw.) G.L. Sm., Senecio macrophyllus M. Bieb., Silene borysthenica (Gruner) Walters, Silene lithuanica Zapał., Silene nutans subsp. dubia (Herbich) Zapal., Sphagnum fimbriatum Wilson, Sphagnum girgensohnii Russow, Sphagnum magellanicum Brid., Tozzia alpina subsp. carpathica (Woloszcz.) Dostal, Trollius altissimus Crantz. Geographic coverage encompasses hundreds of the natural localities of threatened native plants in Poland. Taxa are growing in the habitats of 10 National Parks (Białowieża National Park, Biebrza National Park, Bieszczady National Park, Drawa National Park, Gorce National Park, Kampinos National Park, Karkonosze National Park, Stołowe Mountains National Park, Tatra National Park, Wigry National Park), 37 nature reserves and 55 Natura 2000 sites. GPS coordinates are known for all of the specimens.

The DNA bank is part of the Global Genome Biodiversity Network (GGBN) which was founded in 2011. The network provides a technically optimized DNA collection service facility for all biological research accessible via one central web portal. The network promotes deposition of well documented reference DNA samples after project completion or data publication from scientists of other universities and institutions.

This material is based upon work supported by the Global Genome Initiative under Award No. GGI-GGBN-2021-280. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the Global Genome Initiative

Data Records

The data in this occurrence resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 7,382 records.

4 extension data tables also exist. An extension record supplies extra information about a core record. The number of records in each extension data table is illustrated below.

  • Occurrence (core)
    7382
  • MaterialSample 
    7382
  • Permit 
    7382
  • Preparation 
    7382
  • dnaDerivedData 
    7382

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Downloads

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 7,382 records in English (322 kB) - Update frequency: unknown
Metadata as an EML file download in English (12 kB)
Metadata as an RTF file download in English (11 kB)

Versions

The table below shows only published versions of the resource that are publicly accessible.

Rights

Researchers should respect the following rights statement:

The publisher and rights holder of this work is Kostrzyca Forest Gene Bank, Poland. This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 License.

GBIF Registration

This resource has been registered with GBIF, and assigned the following GBIF UUID: 0c235cd8-26cb-4b12-9f2f-a97fdb716957.  Kostrzyca Forest Gene Bank, Poland publishes this resource, and is itself registered in GBIF as a data publisher endorsed by Polish Biodiversity Information Network.

Keywords

Kostrzyca Forest Gene Bank; forest gene banks; Occurrence

Contacts

Who created the resource:

Małgorzata Pałucka
manager of The Research and Implementation Unit
Kostrzyca Forest Gene Bank
Miłków 300
58-535 Miłków
PL
http://www.lbg.lasy.gov.pl
Ewa Kaczmarek
molecular analysis and biobanking specialist
Kostrzyca Forest Gene Bank
PL
Paulina Kosek
specialist in cryopreservation
Kostrzyca Forest Gene Bank
Miłków 300
58-535 Miłków
PL
http://www.lbg.lasy.gov.pl

Who can answer questions about the resource:

Małgorzata Pałucka
manager of The Research and Implementation Unit
Kostrzyca Forest Gene Bank
Miłków 300
58-535 Miłków
PL
http://www.lbg.lasy.gov.pl

Who filled in the metadata:

Małgorzata Pałucka
manager of The Research and Implementation Unit
Kostrzyca Forest Gene Bank
Miłków 300
58-535 Miłków
PL
http://www.lbg.lasy.gov.pl

Who else was associated with the resource:

Processor
Piotr Tykarski
assistant professor
Faculty of Biology, University of Warsaw
Żwirki i Wigury 101
02-089 Warszawa
Mazowieckie
PL

Geographic Coverage

Geographic coverage encompasses hundreds of the natural localities of threatened native plants in Poland. Taxa are growing in the habitats of 10 National Parks (Białowieża National Park, Biebrza National Park, Bieszczady National Park, Drawa National Park, Gorce National Park, Kampinos National Park, Karkonosze National Park, Stołowe Mountains National Park, Tatra National Park, Wigry National Park), 37 nature reserves and 55 Natura 2000 sites. GPS coordinates are known for all of the specimens.

Bounding Coordinates South West [48.691, 14], North East [54.978, 24.785]

Taxonomic Coverage

Kingdom  Plantae

Temporal Coverage

Start Date / End Date 2017-01-01 / 2022-12-30

Project Data

The project called Sharing Polish genetic data at the Kostrzyca Forest Gene Bank (KFGB) through the GGBN Portal aimed to provide a database of rare herbaceous plant species whose herbarium specimens, tissue fragments and DNA samples are collected at the Kostrzyca Forest Gene Bank.

Title Sharing Polish genetic data at the Kostrzyca Forest Gene Bank (KFGB) through the GGBN Portal
Identifier Kostrzyca Forest Gene Bank Database
Funding The preparation of the database of 225 plant species, 5403 tissue fragments, 1128 DNA samples and 261 herbarium specimens - was made possible by work supported by the Global Genome Initiative under award number GGI-GGBN-2021-280. The collection of plant material was funded by the State Forests National Forest Holding
Study Area Description The project covers the area of Poland, with particular emphasis on Natura 2000 sites, national parks, nature reserves.
Design Description The Kostrzyca Forest Gene Bank Database includes information on 225 plant species, 5403 tissue fragments, 1128 DNA samples and 261 herbarium specimens.

The personnel involved in the project:

Principal Investigator
Małgorzata Pałucka

Additional Metadata

Alternative Identifiers 0c235cd8-26cb-4b12-9f2f-a97fdb716957
https://fgbggbn.lbg.lasy.gov.pl/ipt/resource?r=kfgb-ggbn-db